X-Git-Url: https://fleuret.org/cgi-bin/gitweb/gitweb.cgi?p=agtree2dot.git;a=blobdiff_plain;f=README.md;h=452aa9cba717f36e8a1c9a11c0a09918bff12f2f;hp=4c219b713b8e2f3199a66ead5e6dd46082153076;hb=9d6a57fb731d72261e4e0a334595cc5745765e2a;hpb=63f04303f0320d25d36e6a4f9f535e62cdb139e1 diff --git a/README.md b/README.md index 4c219b7..452aa9c 100644 --- a/README.md +++ b/README.md @@ -1,7 +1,8 @@ # Introduction # -This package provides a function that generates a dot file from the -auto-grad graph. +This package provides a function that generates a +[dot file](https://en.wikipedia.org/wiki/DOT_(graph_description_language)) +from a [pytorch](http://pytorch.org) autograd graph. # Usage # @@ -9,14 +10,17 @@ auto-grad graph. ### agtree2dot.save_dot(variable, variable_labels, result_file) ### -Saves into `result_file` a dot file corresponding to the auto-grad graph for `variable`, which can be either a single `Variable` or a set of `Variable`s. The dictionary `variable_labels` associates strings to some variables, which will be used in the resulting graph. +Saves into `result_file` a dot file corresponding to the autograd +graph for the `Variable` `variable`. The dictionary `variable_labels` +associates strings to some variables, which will be used in the +resulting graph. ## Example ## -A typical use would be: +A typical use is provided in [mlp.py](https://fleuret.org/git-extract/agtree2dot/mlp.py): ```python -import torch +import subprocess from torch import nn from torch.nn import functional as fn @@ -46,14 +50,28 @@ criterion = nn.MSELoss() loss = criterion(output, target) agtree2dot.save_dot(loss, - { input: 'input', loss: 'loss' }, + { + input: 'input', + target: 'target', + loss: 'loss', + mlp.fc1.weight: 'weight1', + mlp.fc1.bias: 'bias1', + mlp.fc2.weight: 'weight2', + mlp.fc2.bias: 'bias2', + }, open('./mlp.dot', 'w')) -``` -which would generate a file mlp.dot, which can then be translated to pdf with +print('Generated mlp.dot') -``` -dot mlp.dot -Lg -T pdf -o mlp.pdf +try: + subprocess.check_call(["dot", "mlp.dot", "-Lg", "-T", "pdf", "-o", "mlp.pdf" ]) +except subprocess.CalledProcessError: + print('Calling the dot command failed. Is Graphviz installed?') + sys.exit(1) + +print('Generated mlp.pdf') ``` -to produce [mlp.pdf](https://fleuret.org/git-extract/agtree2dot/mlp.pdf). +which would generate a file mlp.dot and try to generate +[mlp.pdf](https://fleuret.org/git-extract/agtree2dot/mlp.pdf) from it +with [Graphviz tools.](http://www.graphviz.org/)